RNAseq

⚡ SeqWins, An R Package for Flexible Base Trimming and Comprehensive FASTQ Analysis on Windows
⚡ SeqWins, An R Package for Flexible Base Trimming and Comprehensive FASTQ Analysis on Windows

I developed SeqWins to provide memory-efficient, chunk-wise processing of FASTQ files and offer alignment performance that is competitive with or faster than many Linux-based aligners.

May 23, 2025

🧬 quantify xenograft and host gene expression from the same sample
🧬 quantify xenograft and host gene expression from the same sample

Xenograft tumor is mixture of host cells and xenograft cells. Here I present the methode to simultaneously quantify the gene expression in both xenograft and the host cells.

Mar 28, 2025